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Biliary Atresia

Biliary Atresia

Biliary atresia is a rare, progressive fibro-inflammatory disorder affecting the biliary tree in infancy.

Definition and Pathophysiology

Biliary atresia is characterised by scarring and obstruction of the extrahepatic bile ducts → impairs normal bile flow → cholestasis [Ref]

Cholestasis results in: [Ref]

  • Conjugated hyperbilirubinaemia → pathological neonatal jaundice
  • Inflammation and progressive liver fibrosis → cirrhosis
  • Characteristic stool and urine changes
    • No / little bile entering the intestine → pale stools
    • Conjugated bilirubin excreted in urine → dark urine

Epidemiology

Biliary atresia is rare (5-10 in 100,000 births worldwide) [Ref]

  • It is one of the most important causes of neonatal cholestasis
  • It is a major indication for paediatric liver transplantation

Causes and Risk Factors

The exact cause is unknown, likely multifactorial [Ref]

Risk factors / associations (non-specific and do NOT reliably predict disease): [Ref]

  • Maternal diabetes
  • Maternal drug exposure
  • Prematurity

Family history of liver disease is NOT predictive.

Clinical Features

[Ref]

Neonatal jaundice (due to conjugated hyperbilirubinaemia) Prolonged / persistent jaundice (pathological jaundice), lasting beyond:
  • >2 weeks of age in term infants
  • >3 weeks of age in preterm infants
Cholestasis
  • Pale / chalk-coloured stools – key red flag for biliary atresia
  • Dark urine
Liver changes
  • Hepatomegaly may be an early finding
  • With progression, features of chronic liver disease may develop

Persistent neonatal jaundice + pale stools = ?biliary atresia

Investigation and Diagnosis

Routine investigations in suspected biliary atresia:

Test Description / findings
Shared initial neonatal jaundice bloods Haematology tests:
  • FBC and blood film
  • Blood group (mother and baby)
  • Coombs test
  • G6PD levels

Liver tests:

  • Serum bilirubin levels (split bilirubin levels – measures both conjugated and unconjugated levels)
  • Liver enzymes (AST, ALT, GGT, ALP)

Routine metabolic screening (including for congenital hypothyroidism)

Key biochemical findings in biliary atresia: [Ref]

  • Conjugated hyperbilirubinaemia (↑ total bilirubin, ↑ conjugated bilirubin levels)
  • GGT is often elevated
  • AST / ALT may be normal or mildly raised in early disease
Initial imaging: abdominal ultrasound Supportive findings: [Ref]
  • Absent or abnormal gallbladder
  • Absent / poorly visualised extrahepatic bile ducts
  • Triangular cord sign

NB a normal ultrasound does NOT exclude biliary atresia

Definitive test: intraoperative cholangiography (IOC) Intraoperative cholangiography involves injecting contrast into the biliary tree to assess duct patency [Ref]
  • Failure to demonstrate a patent biliary tree or failure of contrast to reach the intestine confirms biliary atresia

If biliary atresia is confirmed, surgery (Kasai procedure) can be performed during the same operation (see below for more details) [Ref]

Additional specialist investigations (not routinely required, used selectively by specialist): [Ref]

  • Liver biopsy
  • HIDA scan

Management

Refer all patients urgently to a specialist paediatric hepatology / hepatobiliary centre

Initial supportive management [Ref]
  • Optimise nutrition, including high-calorie feeds and replacement of fat-soluble vitamins A, D, E and K where deficient
  • Correct complications of cholestasis (e.g. vitamin K deficiency, coagulopathy)
Definitive management [Ref] 1st line definitive management: surgery (Kasai portoenterostomy)
  • Earlier surgery gives better outcomes
  • Involves excision of the fibrosed extrahepatic biliary remnants at the porta hepatis + a Roux-en-Y loop of jejunum is connected to the porta hepatis to allow bile drainage from residual microscopic bile ductules

Long-term post-operative management:

  • Nutritional support and fat-soluble vitamin replacement
  • Monitor for complications (ascending cholangitis, persistent cholestasis, portal hypertension, progressive liver disease)
  • Ursodeoxycholic acid is commonly used

Last resort: liver transplantation [Ref]

  • Indicated if Kasai portoenterostomy fails to establish adequate bile drainage or if the patient develops progressive / end-stage liver disease or major complications
  • Biliary atresia remains a major indication for paediatric liver transplantation

Complications

Complications of biliary atresia (→ progressive cholestatic liver disease): [Ref]

  • Malnutrition and fat-soluble vitamin deficiency
  • Coagulopathy (esp. from vitamin K deficiency)
  • Progressive hepatic fibrosis → cirrhosis → portal hypertension

Post-Kasai (surgery) complications: [Ref]

  • Ascending cholangitis – most common complication after Kasai portoenterostomy
  • Persistent / recurrent cholestasis
  • Progressive liver fibrosis / cirrhosis despite surgery
  • Portal hypertension and associated complications

References

Bibliography

  1. Ge L, Yang J, Li T, Zhu T, Davenport M, Petersen C, et al. Diagnostic and management guidelines for biliary atresia in 2025. HepatoBiliary Surgery and Nutrition. 2026;15(4):103
  2. Rabbani T, Anouti A, Ayala German AG, Meadow J, Pandurangi S. Easily missed?: Early recognition of biliary atresia. BMJ. 2026;393:e088453

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